A Search for Hydride Shift Mechanism in Enzymatic Synthesis of Tetrahydrobiopterin
Sepiapterin reductase (SR) is a homodimeric enzyme responsible for the synthesis of tetrahydrobiopterin (BH4), a multifunctional cofactor associated with neuropsychiatric diseases1,2,3. Based on biochemical and crystallographic data4,5, it has been hypnotized that SR reduces the C1’ carbonyl and then catalyses an isomerization reaction shifting the C2’ carbonyl group to the C1’ position. The final catalytic step includes NADPH-dependent reduction of the carbonyl group and generates L-erythro-BH4. However, underlying mechanistic details of every step are not completely understood. In this computational study, we seek an answer for the following outstanding question: Is there a potential hydride shift mechanism in the isomerization step? Molecular dynamics and QM/MM molecular dynamics are in progress to provide precise information for enzymatic formation of BH4. The underlying chemistry of this intriguing reaction may facilitate drug design for diseases such as Alzheimer’s and Parkinson’s disease.
[1] Friedman, J.; Roze, E.; Abdenur, J. E.; Chang, R.; Gasperini, S.; Saletti, V.; Wali, G. M.; Eiroa, H.; Neville, B.; Felice, A.; Parascandalo, R.; Zafeiriou, D. I.; Arrabal-Fernandez, L.; Dill, P.; Eichler, F. S.; Echenne, B.; Gutierrez-Solana, L. G.; Hoffmann, G. F.; Hyland, K.; Kusmierska, K.; Tijssen, M. A. J.; Lutz, T.; Mazzuca, M.; Penzien, J.; Poll-The, B. T.; Sykut-Cegielska, J.; Szymanska, K.; Thöny, B.; Blau, N. Sepiapterin reductase deficiency: A Treatable Mimic of Cerebral Palsy. Annals of Neurology, 2012, 71, 520–530.
[2] Lohmann, E.; Köroĝlu, Ç.; Hanagasi, H. A.; Dursun, B.; Taşan, E.; Tolun, A. Parkinsonism and Related Disorders 2012, 18, 191.
[3] Smith, G. K. Archives of Biochemistry and Biophysics 1987, 255, 254.
[4] Auerbach, G.; Herrmann, A.; Gütlich, M.; Fischer, M.; Jacob, U.; Bacher, A.; Huber, R. EMBO Journal 1997, 16, 7219.
[5] Supangant, S.; Choi, Y K.; Son, D.; Han, C.; Lee, K. H. Act Crystallographica Section F Structural Biology and Crystallization Communications 2005, 61, 202.